Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g29804.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000011:301443...304612
NR annotation: CAH3125185.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9Z209	Layilin OS=Cricetulus griseus OX=10029 GN=LAYN PE=1 SV=1
Q6UX15	Layilin OS=Homo sapiens OX=9606 GN=LAYN PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001304	Domain	C-type lectin-like	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR051505	Family	C-type lectin domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14789	CHONDROLECTIN VARIANT CHODLFDELTAE.	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0016477	Biological Process	cell migration	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0050840	Molecular Function	extracellular matrix binding	Interproscan
GO:1990430	Molecular Function	extracellular matrix protein binding	Interproscan