Detailed information of Pocillopora_acuta_HIv2___RNAseq.g29891.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000011:1213295...1216913
NR annotation: RMX44881.1, hypothetical protein pdam_00012549 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P42674Blastula protease 10 OS=Paracentrotus lividus OX=7656 GN=BP10 PE=2 SV=1
P98068Protein SpAN OS=Strongylocentrotus purpuratus OX=7668 GN=SPAN PE=2 SV=1
Q9U3S9Zinc metalloproteinase nas-6 OS=Caenorhabditis elegans OX=6239 GN=nas-6 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01549ShKShK domain-likeDomainInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003582DomainShKT domainInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00444WNT5; wingless-type MMTV integration site family, member 5-Glycosaminoglycan binding proteinsko00536deepkoala

TOP