Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g29917.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000011:1501900...1506742
NR annotation: XP_027039222.1, ran GTPase-activating protein 1-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P46061	Ran GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Rangap1 PE=1 SV=2
P46060	Ran GTPase-activating protein 1 OS=Homo sapiens OX=9606 GN=RANGAP1 PE=1 SV=1
O13066	Ran GTPase-activating protein 1 OS=Xenopus laevis OX=8355 GN=rangap1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR027038	Family	Ran GTPase-activating protein	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24113	RAN GTPASE-ACTIVATING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006913	Biological Process	nucleocytoplasmic transport	Interproscan
GO:0031267	Molecular Function	small GTPase binding	Interproscan
GO:0048471	Cellular Component	perinuclear region of cytoplasm	Interproscan
GO:0090630	Biological Process	activation of GTPase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14319	RANGAP1; Ran GTPase-activating protein 1	-	Messenger RNA biogenesis	ko03019	deepkoala