Detailed information of Pocillopora_acuta_HIv2___RNAseq.g30020.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000011:2569513...2592709
NR annotation: XP_027060638.1, uncharacterized protein LOC113687134 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q80U35Rho guanine nucleotide exchange factor 17 OS=Mus musculus OX=10090 GN=Arhgef17 PE=1 SV=2
Q96PE2Rho guanine nucleotide exchange factor 17 OS=Homo sapiens OX=9606 GN=ARHGEF17 PE=1 SV=1
Q21653Rho guanine nucleotide exchange factor osg-1 OS=Caenorhabditis elegans OX=6239 GN=osg-1 PE=2 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19056WD40_2WD40 repeated domainRepeatInterproscan
PF19057PH_19PH domainDomainInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000219DomainDbl homology (DH) domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR039919FamilyRho guanine nucleotide exchange factor 10/17Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12877RHO GUANINE NUCLEOTIDE EXCHANGE FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20689ARHGEF17; Rho guanine nucleotide exchange factor 17-Membrane traffickingko04131deepkoala

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