Detailed information of Pocillopora_acuta_HIv2___RNAseq.g30194.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000011:4282346...4286771
NR annotation: CAH3126058.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P07746High mobility group-T protein OS=Oncorhynchus mykiss OX=8022 PE=2 SV=2
P40621HMG1/2-like protein OS=Triticum aestivum OX=4565 PE=2 SV=1
Q42344High mobility group B protein 4 OS=Arabidopsis thaliana OX=3702 GN=HMGB4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR050342FamilyHigh Mobility Group Box (HMGB)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48112HIGH MOBILITY GROUP PROTEIN DSP1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008301Molecular FunctionDNA binding, bendingInterproscan

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