Detailed information of Pocillopora_acuta_HIv2___RNAseq.g30836.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000003:6432806...6444015
NR annotation: RMX36545.1, hypothetical protein pdam_00019227 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P46939Utrophin OS=Homo sapiens OX=9606 GN=UTRN PE=1 SV=2
G3V7L1Utrophin OS=Rattus norvegicus OX=10116 GN=Utrn PE=1 SV=3
Q9QWN8Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR002017RepeatSpectrin repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP