Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g30867.t1b in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000003:6789469...6795979
NR annotation: CAH3135439.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O70475	UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=1 SV=1
O70199	UDP-glucose 6-dehydrogenase OS=Rattus norvegicus OX=10116 GN=Ugdh PE=1 SV=1
Q5F3T9	UDP-glucose 6-dehydrogenase OS=Gallus gallus OX=9031 GN=UGDH PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03721	UDPG_MGDP_dh_N	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain	Domain	Interproscan
PF00984	UDPG_MGDP_dh	UDP-glucose/GDP-mannose dehydrogenase family, central domain	Domain	Interproscan
PF03720	UDPG_MGDP_dh_C	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036220	Homologous_superfamily	UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily	Interproscan
IPR001732	Domain	UDP-glucose/GDP-mannose dehydrogenase, N-terminal	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR028356	Family	UDP-glucose 6-dehydrogenase, eukaryotic type	Interproscan
IPR017476	Family	UDP-glucose/GDP-mannose dehydrogenase	Interproscan
IPR014026	Domain	UDP-glucose/GDP-mannose dehydrogenase, dimerisation	Interproscan
IPR008927	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan
IPR014027	Domain	UDP-glucose/GDP-mannose dehydrogenase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11374	UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0051287	Molecular Function	NAD binding	Interproscan
GO:0003979	Molecular Function	UDP-glucose 6-dehydrogenase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006024	Biological Process	glycosaminoglycan biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00012	UGDH, ugd; UDPglucose 6-dehydrogenase	EC:1.1.1.22	O-Antigen nucleotide sugar biosynthesis	ko00541	deepkoala