Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g31140.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000028:2058997...2061183
NR annotation: XP_027048355.1, homeobox protein engrailed-like ceh-16 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A9ZPC9	Homeobox protein engrailed OS=Lymnaea stagnalis OX=6523 GN=EN PE=2 SV=1
G5EE18	Homeobox protein ceh-28 OS=Caenorhabditis elegans OX=6239 GN=ceh-28 PE=2 SV=1
Q810B3	Brain-specific homeobox protein homolog OS=Mus musculus OX=10090 GN=Bsx PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR050848	Family	Homeobox domain-containing transcription factors	Interproscan
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24333	HOMEO BOX HB9 LIKE A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15607	TLX3, HOX11L2; T-cell leukemia homeobox protein 3	-	Transcription factors	ko03000	deepkoala