Detailed information of Pocillopora_acuta_HIv2___RNAseq.g31255.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000037:770653...776120
NR annotation: XP_027037139.1, uncharacterized protein LOC113665620 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20641TAF1C_beta-propTAF1C, beta-propellerRepeatInterproscan
PF20642TAF1C_HBTAF1C, helical bundle domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR049087DomainTAF1C, beta-propeller domainInterproscan
IPR049090DomainTAF1C, helical bundle domainInterproscan
IPR038801FamilyTATA box-binding protein-associated factor RNA polymerase I subunit CInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15319TATA BOX-BINDING PROTEIN ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT CInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0001164Molecular FunctionRNA polymerase I core promoter sequence-specific DNA bindingInterproscan
GO:0001650Cellular Componentfibrillar centerInterproscan
GO:0006360Biological Processtranscription by RNA polymerase IInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15214TAF1C; TATA box-binding protein-associated factor RNA polymerase I subunit C-Transcription machineryko03021deepkoala

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