Detailed information of Pocillopora_acuta_HIv2___RNAseq.g318.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000015:3466372...3467934
NR annotation: XP_027044962.1, visual pigment-like receptor peropsin [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O57422Melanopsin-B OS=Xenopus laevis OX=8355 GN=opn4b PE=2 SV=1
Q5XXP2Melanopsin OS=Phodopus sungorus OX=10044 GN=OPN4 PE=2 SV=1
Q8R456Melanopsin OS=Rattus norvegicus OX=10116 GN=Opn4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050125FamilyG-protein coupled receptor opsinsInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR027430Binding_siteVisual pigments (opsins) retinal binding siteInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24240OPSINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0007602Biological ProcessphototransductionInterproscan
GO:0008020Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482Biological Processcellular response to light stimulusInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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