Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g3325.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000006:2218809...2223609
NR annotation: RMX41740.1, hypothetical protein pdam_00005573, partial [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A7E3Q8	Plastin-3 OS=Bos taurus OX=9913 GN=PLS3 PE=2 SV=1
P13797	Plastin-3 OS=Homo sapiens OX=9606 GN=PLS3 PE=1 SV=4
Q63598	Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036872	Homologous_superfamily	CH domain superfamily	Interproscan
IPR001715	Domain	Calponin homology domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR039959	Family	Fimbrin/Plastin	Interproscan
IPR001589	Conserved_site	Actinin-type actin-binding domain, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19961	FIMBRIN/PLASTIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005884	Cellular Component	actin filament	Interproscan
GO:0032432	Cellular Component	actin filament bundle	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan
GO:0051017	Biological Process	actin filament bundle assembly	Interproscan
GO:0051639	Biological Process	actin filament network formation	Interproscan