Detailed information of Pocillopora_acuta_HIv2___RNAseq.g3482.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000006:4103947...4110266
NR annotation: CAH3147659.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8JIR0Polycomb complex protein BMI-1-A OS=Danio rerio OX=7955 GN=bmi1a PE=1 SV=2
Q7T3E6Polycomb complex protein BMI-1-B OS=Danio rerio OX=7955 GN=bmi1b PE=2 SV=1
Q5SDR3Polycomb complex protein BMI-1 OS=Gallus gallus OX=9031 GN=BMI1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UFD|RAWUL
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16207RAWULRAWUL domain RING finger- and WD40-associated ubiquitin-likeDomainInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR032443DomainRAWUL domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10825RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0035102Cellular ComponentPRC1 complexInterproscan
GO:1990841Molecular Functionpromoter-specific chromatin bindingInterproscan

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