Genomic Location: Pocillopora_acuta_HIv2___xfSc0000006:4870005...4891158
NR annotation: CAH3147727.1, unnamed protein product [Pocillopora meandrina]
| CDS | ||||
| Pocillopora_acuta_HIv2___RNAseq.g3546.t1 | ||||
| Transcript |
| Pocillopora_acuta_HIv2___RNAseq.g3546.t1 |
| Protein |
| Pocillopora_acuta_HIv2___RNAseq.g3546.t1 |
| Uniprot term | Description |
|---|---|
| Q9P283 | Semaphorin-5B OS=Homo sapiens OX=9606 GN=SEMA5B PE=1 SV=4 |
| Q60519 | Semaphorin-5B OS=Mus musculus OX=10090 GN=Sema5b PE=2 SV=2 |
| D3YXG0 | Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00090 | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
| PF01437 | PSI | Plexin repeat | Family | Interproscan |
| PF01403 | Sema | Sema domain | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036352 | Homologous_superfamily | Sema domain superfamily | Interproscan |
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR001627 | Domain | Sema domain | Interproscan |
| IPR027231 | Family | Semaphorin | Interproscan |
| IPR016201 | Domain | PSI domain | Interproscan |
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| IPR002165 | Repeat | Plexin repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11036 | SEMAPHORIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0001755 | Biological Process | neural crest cell migration | Interproscan |
| GO:0030215 | Molecular Function | semaphorin receptor binding | Interproscan |
| GO:0030335 | Biological Process | positive regulation of cell migration | Interproscan |
| GO:0045499 | Molecular Function | chemorepellent activity | Interproscan |
| GO:0048843 | Biological Process | negative regulation of axon extension involved in axon guidance | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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