Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g3829.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000024:2314893...2319776
NR annotation: CAH3045221.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q566X8	Diencephalon/mesencephalon homeobox protein 1-B OS=Danio rerio OX=7955 GN=dmbx1b PE=2 SV=1
F1NEA7	Diencephalon/mesencephalon homeobox protein 1 OS=Gallus gallus OX=9031 GN=DMBX1 PE=2 SV=2
Q8JI10	Diencephalon/mesencephalon homeobox protein 1-A OS=Danio rerio OX=7955 GN=dmbx1a PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052488	Family	Diencephalon/mesencephalon homeobox	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46639	DIENCEPHALON/MESENCEPHALON HOMEOBOX PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24893	DMBX1; diencephalon/mesencephalon homeobox protein 1	-	Transcription factors	ko03000	deepkoala