Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g3834.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000024:2360883...2363778
NR annotation: XP_027036543.1, homeobox protein OTX-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q566X8	Diencephalon/mesencephalon homeobox protein 1-B OS=Danio rerio OX=7955 GN=dmbx1b PE=2 SV=1
F1NEA7	Diencephalon/mesencephalon homeobox protein 1 OS=Gallus gallus OX=9031 GN=DMBX1 PE=2 SV=2
Q91ZK4	Diencephalon/mesencephalon homeobox protein 1 OS=Mus musculus OX=10090 GN=Dmbx1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR052488	Family	Diencephalon/mesencephalon homeobox	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46639	DIENCEPHALON/MESENCEPHALON HOMEOBOX PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan