Genomic Location: Pocillopora_acuta_HIv2___Sc0000029:53...10610
NR annotation: XP_022786561.1, cartilage intermediate layer protein 1-like [Stylophora pistillata]
| CDS | ||||
| Pocillopora_acuta_HIv2___RNAseq.g3907.t1 | ||||
| Transcript |
| Pocillopora_acuta_HIv2___RNAseq.g3907.t1 |
| Protein |
| Pocillopora_acuta_HIv2___RNAseq.g3907.t1 |
| Uniprot term | Description |
|---|---|
| D3YXG0 | Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1 |
| C0HL12 | Adhesion G protein-coupled receptor B1 OS=Rattus norvegicus OX=10116 GN=Adgrb1 PE=1 SV=1 |
| Q3UHD1 | Adhesion G protein-coupled receptor B1 OS=Mus musculus OX=10090 GN=Adgrb1 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| PF10591 | SPARC_Ca_bdg | Secreted protein acidic and rich in cysteine Ca binding region | Domain | Interproscan |
| PF00090 | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| IPR011992 | Homologous_superfamily | EF-hand domain pair | Interproscan |
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR002350 | Domain | Kazal domain | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR039675 | Family | Cartilage intermediate layer protein 1/2 | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR036058 | Homologous_superfamily | Kazal domain superfamily | Interproscan |
| IPR008969 | Homologous_superfamily | Carboxypeptidase-like, regulatory domain superfamily | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR018247 | Binding_site | EF-Hand 1, calcium-binding site | Interproscan |
| IPR019577 | Domain | SPARC/Testican, calcium-binding domain | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15031 | CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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