Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g3939.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000029:254033...266651
NR annotation: XP_027045738.1, spondin-2-like [Pocillopora damicornis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9W770	Spondin-1 OS=Gallus gallus OX=9031 GN=SPON1 PE=2 SV=1
P35446	Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1
Q8VCC9	Spondin-1 OS=Mus musculus OX=10090 GN=Spon1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19028	TSP1_spondin	Spondin-like TSP1 domain	Domain	Interproscan
PF06468	Spond_N	Spondin_N	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051418	Family	Spondin/Thrombospondin type-1 domain-containing	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR044004	Domain	Spondin-like TSP1 domain	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR009465	Domain	Spondin, N-terminal	Interproscan
IPR038678	Homologous_superfamily	Spondin, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11311	SPONDIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24427	SPON1; spondin-1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala