Detailed information of Pocillopora_acuta_HIv2___RNAseq.g4116.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000055:103939...117283
NR annotation: CAH3115776.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P59807Chondroitin sulfate ABC endolyase OS=Proteus vulgaris OX=585 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09093Lyase_catalytLyase, catalyticRepeatInterproscan
PF02278Lyase_8Polysaccharide lyase family 8, super-sandwich domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039174FamilyChondroitin sulfate ABC lyaseInterproscan
IPR015177DomainLyase, catalyticInterproscan
IPR003159DomainPolysaccharide lyase family 8, central domainInterproscan
IPR011013Homologous_superfamilyGalactose mutarotase-like domain superfamilyInterproscan
IPR014718Homologous_superfamilyGlycoside hydrolase-type carbohydrate-bindingInterproscan
IPR011071Homologous_superfamilyPolysaccharide lyase family 8-like, C-terminalInterproscan
IPR008929Homologous_superfamilyChondroitin AC/alginate lyaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37322-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006027Biological Processglycosaminoglycan catabolic processInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0016829Molecular Functionlyase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan

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