Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g4158.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000030:224052...232449
NR annotation: XP_027037428.1, cystinosin-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A7MB63	Cystinosin OS=Bos taurus OX=9913 GN=CTNS PE=2 SV=1
O60931	Cystinosin OS=Homo sapiens OX=9606 GN=CTNS PE=1 SV=2
P57757	Cystinosin OS=Mus musculus OX=10090 GN=Ctns PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04193	PQ-loop	PQ loop repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005282	Family	Lysosomal cystine transporter	Interproscan
IPR006603	Repeat	PQ-loop repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13131	CYSTINOSIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005774	Cellular Component	vacuolar membrane	Interproscan
GO:0015184	Molecular Function	L-cystine transmembrane transporter activity	Interproscan
GO:0015811	Biological Process	L-cystine transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12386	CTNS; cystinosin	-	Exosome	ko04147	deepkoala