Detailed information of Pocillopora_acuta_HIv2___RNAseq.g4202.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000030:870553...898495
NR annotation: RMX44832.1, hypothetical protein pdam_00009293 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P04114Apolipoprotein B-100 OS=Homo sapiens OX=9606 GN=APOB PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01347Vitellogenin_NLipoprotein amino terminal regionRepeatInterproscan
PF09172Vit_open_b-shtVitellinogen, open beta-sheetDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF06448DUF1081Domain of Unknown Function (DUF1081)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011030Homologous_superfamilyLipovitellin-phosvitin complex, superhelical domainInterproscan
IPR001747DomainVitellogenin, N-terminalInterproscan
IPR050733FamilyVitellogenin/ApolipophorinInterproscan
IPR015816Homologous_superfamilyVitellinogen, beta-sheet N-terminalInterproscan
IPR015819Homologous_superfamilyLipid transport protein, beta-sheet shellInterproscan
IPR015255DomainVitellinogen, open beta-sheetInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR015817Homologous_superfamilyVitellinogen, open beta-sheet, subdomain 1Interproscan
IPR009454DomainLipid transport, open beta-sheetInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23345VITELLOGENIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005319Molecular Functionlipid transporter activityInterproscan
GO:0006869Biological Processlipid transportInterproscan

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