Detailed information of Pocillopora_acuta_HIv2___RNAseq.g4250.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000030:1298265...1326884
NR annotation: CAH3115763.1, unnamed protein product, partial [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q61824Disintegrin and metalloproteinase domain-containing protein 12 OS=Mus musculus OX=10090 GN=Adam12 PE=1 SV=2
O43184Disintegrin and metalloproteinase domain-containing protein 12 OS=Homo sapiens OX=9606 GN=ADAM12 PE=1 SV=3
Q98UF9Zinc metalloproteinase-disintegrin-like HF3 OS=Bothrops jararaca OX=8724 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01421ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF08516ADAM_CRADAM cysteine-richFamilyInterproscan
PF00200DisintegrinDisintegrinDomainInterproscan
PF01562Pep_M12B_propepReprolysin family propeptideFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR001762DomainDisintegrin domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR001590DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR034027DomainReprolysin domain, adamalysin-typeInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR036436Homologous_superfamilyDisintegrin domain superfamilyInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR006586DomainADAM, cysteine-rich domainInterproscan
IPR002870DomainPeptidase M12B, propeptideInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11905ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

TOP