Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g4308.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000046:442684...456446
NR annotation: XP_027042888.1, kinesin-like protein KIF23 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Pocillopora_acuta_HIv2___RNAseq.g4308.t1

ATGCGACCAATCCCGAAAACTCCTTCTTCGACGAAGACCCCGCGCAGTGCGAAGACACCAAGACGACCTACAGGTAACAAGGATCCTGTCGAGGTGTATTGCCGAATCAGACCTCTCGGCAATAATGAAGAAGAATCTTGCGTTCACATTATCAGCGATACTGTGTTACAGCTAACAGCGCCAAAGAATTCTGCAGGATACAAGTCTGGCCACCGAATAGAGACACAACATACATTCAAAAAGATTTATGATGAGAAGACATCCCAGAAGGTGCTTTATGATAATGTGGCCATGCCCTTGGTTGATGATTTGATTCATGGTAAAAATGGTTTGATATTTGCTTATGGTATCACTGGGTCTGGTAAGACACACACCATGACAGGAATGCCCAGTGACAGTGGCTTGCTTCCAAGGTGTTTAGATGTCATCTTTAACTCTATTGGAGAATTGCAGGCTCCTAAATATGTCTTTAAACCAGACAAATCCAATGGCATTGAAATACAAACAGAACTTGAAGCAAAACTTGAGAAAGAAAAACGTGTAAAAGAAGCTGCTCTCCAGGCAGCTCAAGGAGGTAGAAACAGGAATGCTGATAATGACTTTGCTGATCTCATAAGAGTAGCTGAGACAGGAGTTATTTCTGGAGTGGATGAGGATAACAGCTATGCAGTGTTTGTGTCATACTTTGAAATATACAACAACTACATTTATGATCTGCTTGATGAGACTCCTGTGGATCCCATTTGTCCAAAACCACCAGTTTCAAAAAATCTTAGAGAAGACATGAATCGTAACATGTATGTCAGTGGTGTCACAGAAATTGAAGTCAAAAGCACAGAAGAGGCTTACAGCATATTCTGGAAAGGCCAAAAGAAAAGGCGTGTCGCCAACACAGTACTGAATCGTGAGTCCAGTAGGAGCCACAGTGTGTTTGCCATCAAACTTGTACAAGCACCATTAGATCCTGACGGTGAAGAGGTCTTGCAGGACAAAAATCAGATTGCTGTAGCCACATTATCACTGTGTGATCTAGCAGGGTCTGAGAGGACAAATAGGACCAGAGCTGGTGGAGACAGACTGCGAGAAGCAGGTAACATCAATGCATCCTTGATGACATTAAGAACTTGTATGGAGGTTCTTAGAGAGAACCAAGCAAATGCTGAGAATGGTGTTTCTCCAAAGATTGTCCCCTATAGAGACACAAAGTTGACTCATCTGTTTAAGAATTTCTTTGACGGAGAAGGGAAGGTGCGCATGGTGGTCTGTTTAAACCCCAATGCTGATGATTATGATGAGAGTGTGCATGTCATGAAATTTGCAGAAGTTACACAAGATGTTGTTATAGCCAGACCAGAGTCAGTCAGATTTGACACTGGACTAACTCCAGGAAGAAGAAGAGCAAATCAAATGTACAAGGAAGTTCTAGCAAAGGTTGAAGAAAGTAATGGTGACGGTGAAACTGTGATTGTAGCCAAGCCAGTTCATACCATGGGACCGCCTTTCCCTCTATTTGAGTTGAATTCTCCAGAAGATAGCACAACACTGGTAAATTTGATGCACTACCTTCAAGATAGACAAAGACGGCGACAAACCCTTATTGATGATTTGTCAAGAAAAGAGGGAGTTTTCAGGGCTCATCTATTGGCATTGGAAAAAGAAAACAGTCAAGCAAATGGAATTGTAGCAAGCCTTAAAGCAACAATTGAGGAGAAAGACAGAGATATTCAGAAACTTGAAAGAAGGCTGAAGGCGCTAACACAAAAGAACGAGATGCTTCAGAAGACGGCAGAGATGTACGAACAAGACAAGAAAGAACTACGATATGAACTGGATGATCAGAAGAAAAGAGCAGACAAAGAGAAGACCGACAAACTTAAAATGCGCCAGGCCTTGAAAGGAGTTGTGTCACAAGAAAAGGGAAAATGGGAACGGGAGTGTTCGAAACGCGTCAAGGACAAGGAAATGGAGATGCAGGCCAAAATGTGGCAGAAAGAGGAAAAACTAAGACAACTCAAGGAGATTGTGCAGAATATGAAGACGAATGACTCGGGTCCTGTTACTCGTGCTCAACTTAAAGCCGCCTCCATGCCTAGATCGAAGTCTCCACCGCCTGTTTCCAGAAAGCCTCCGATCAAATCTCGTCACAGACGATCCAAGTCTTCGGATTGTTGGATAGAGCACAAACCCTTGACTCACCTAGAAACAGGCACAGTAATGAAACCGTCGATAAAGAACAAGAAAACCGTTGCCAGGCCTGGTGAGAAGGACTTCAAAGACACTAATGCCACAAACTATGTTTTAGCCCACCAAGAGGAAGATTCTGCTGGTGAAATTGAGACTAAGTTGATCAAAGGAGACGTGTACAAGACTGTGGGAGGAGGTCACTGCATCCAGTTTACAGAGGTGGAAACTTTGAAAACAAGATCTGACGAGCTAACTAGTCCGGGACGAAAACGACACGCGTCTGACTCGATCGATGATGAGAGCCATTCCAGCTGGACTGATGTGGAAACAAGGTGTTCAACGGCAATCGAAGGCAGACCTGGGACTGGACCCAGTTATTGTCACACTGCAGCTAAGAAAAAGAAGCCCTAG

Transcript

Pocillopora_acuta_HIv2___RNAseq.g4308.t1

Protein

Uniprot

Uniprot term	Description
Q02241	Kinesin-like protein KIF23 OS=Homo sapiens OX=9606 GN=KIF23 PE=1 SV=3
E9Q5G3	Kinesin-like protein KIF23 OS=Mus musculus OX=10090 GN=Kif23 PE=1 SV=1
O95235	Kinesin-like protein KIF20A OS=Homo sapiens OX=9606 GN=KIF20A PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16540	MKLP1_Arf_bdg	Arf6-interacting domain of mitotic kinesin-like protein 1	Domain	Interproscan
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR038105	Homologous_superfamily	Kinesin-like protein Kif23, Arf6-interacting domain superfamily	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032384	Domain	Kinesin-like protein Kif23, Arf6-interacting domain	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24115	KINESIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005871	Cellular Component	kinesin complex	Interproscan
GO:0005874	Cellular Component	microtubule	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17387	KIF23; kinesin family member 23	-	Cytoskeleton proteins	ko04812	deepkoala