Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g4758.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000003:1348334...1352152
NR annotation: CAH3041669.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation PACUT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O60762	Dolichol-phosphate mannosyltransferase subunit 1 OS=Homo sapiens OX=9606 GN=DPM1 PE=1 SV=1
A5GFZ5	Dolichol-phosphate mannosyltransferase subunit 1 OS=Sus scrofa OX=9823 GN=DPM1 PE=3 SV=1
Q9WU83	Dolichol-phosphate mannosyltransferase subunit 1 OS=Cricetulus griseus OX=10029 GN=DPM1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005863 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00535 all species →	Glycos_transf_2	Glycosyl transferase family 2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039528 all species →	Family	DPM1-like	Interproscan
IPR029044 all species →	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR001173 all species →	Domain	Glycosyltransferase 2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43398 all species →	DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004582 all species →	Molecular Function	dolichyl-phosphate beta-D-mannosyltransferase activity	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006488 all species →	Biological Process	dolichol-linked oligosaccharide biosynthetic process	Interproscan
GO:0006506 all species →	Biological Process	GPI anchor biosynthetic process	Interproscan
GO:0035269 all species →	Biological Process	protein O-linked mannosylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00721	DPM1; dolichol-phosphate mannosyltransferase	EC:2.4.1.83	Glycosyltransferases	ko01003	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.