Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g4942.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000003:3116593...3123213
NR annotation: XP_027058701.1, phosphatidylinositol glycan anchor biosynthesis class U protein-like [Pocillopora damicornis]
Species abbreviation PACUT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8CHJ0	GPI-anchor transamidase component PIGU OS=Cricetulus griseus OX=10029 GN=PIGU PE=1 SV=3
Q9H490	GPI-anchor transamidase component PIGU OS=Homo sapiens OX=9606 GN=PIGU PE=1 SV=3
Q8CHJ1	GPI-anchor transamidase component PIGU OS=Rattus norvegicus OX=10116 GN=Pigu PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005450 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06728 all species →	PIG-U	GPI transamidase subunit PIG-U	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009600 all species →	Family	GPI transamidase subunit PIG-U	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13121 all species →	GPI TRANSAMIDASE COMPONENT PIG-U	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016255 all species →	Biological Process	attachment of GPI anchor to protein	Interproscan
GO:0042765 all species →	Cellular Component	GPI-anchor transamidase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05293	PIGU; GPI-anchor transamidase subunit U	-	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	ko00563	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.