Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g4961.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000003:3284247...3286683
NR annotation: CAH3041202.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q2T9W1	Sorting nexin-20 OS=Bos taurus OX=9913 GN=SNX20 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00787	PX	PX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001683	Domain	Phox homology	Interproscan
IPR039937	Family	Sorting nexin SNX20/SNX21	Interproscan
IPR036871	Homologous_superfamily	PX domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20939	SORTING NEXIN 20, 21	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0035091	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0015031	Biological Process	protein transport	Interproscan
GO:0031901	Cellular Component	early endosome membrane	Interproscan
GO:1901981	Molecular Function	phosphatidylinositol phosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17931	SNX20; sorting nexin-20	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala