Detailed information of Pocillopora_acuta_HIv2___RNAseq.g5235.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000003:6308485...6311898
NR annotation: CAH3154112.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IZU8Dermatan-sulfate epimerase-like protein OS=Homo sapiens OX=9606 GN=DSEL PE=1 SV=2
Q0VBN2Dermatan-sulfate epimerase-like protein OS=Mus musculus OX=10090 GN=Dsel PE=2 SV=1
P0C2H4Dermatan-sulfate epimerase OS=Bos taurus OX=9913 GN=DSE PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16332DUF4962Domain of unknown function (DUF4962)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052447FamilyDermatan-Sulfate IsomeraseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR008929Homologous_superfamilyChondroitin AC/alginate lyaseInterproscan
IPR032518DomainHeparinase II, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15532-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030204Biological Processchondroitin sulfate metabolic processInterproscan
GO:0030205Biological Processdermatan sulfate metabolic processInterproscan
GO:0047757Molecular Functionchondroitin-glucuronate 5-epimerase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01794DSE; chondroitin-glucuronate 5-epimeraseEC:5.1.3.19
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfateko00532deepkoala

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