Detailed information of Pocillopora_acuta_HIv2___RNAseq.g5343.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000003:7485980...7509439
NR annotation: CAH3032138.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q68CZ1Protein fantom OS=Homo sapiens OX=9606 GN=RPGRIP1L PE=1 SV=2
Q8CG73Protein fantom OS=Mus musculus OX=10090 GN=Rpgrip1l PE=1 SV=2
Q9GLM3X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 OS=Bos taurus OX=9913 GN=RPGRIP1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18111RPGR1_CRetinitis pigmentosa G-protein regulator interacting C-terminalDomainInterproscan
PF11618C2-C2_1First C2 domain of RPGR-interacting protein 1DomainInterproscan
PF00168C2C2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000008DomainC2 domainInterproscan
IPR031139FamilyRPGRIP1 familyInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR041091DomainRPGRIP1, C-terminalInterproscan
IPR021656DomainRPGR-interacting protein 1, first C2 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14240RETINITIS PIGMENTOSA GTPASE REGULATOR-INTERACTING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0035869Cellular Componentciliary transition zoneInterproscan
GO:1905515Biological Processnon-motile cilium assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16550RPGRIP1L; protein fantom-Cilium and associated proteinsko03037deepkoala

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