Detailed information of Pocillopora_acuta_HIv2___RNAseq.g5604.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000003:10465408...10467370
NR annotation: XP_027055691.1, melanopsin-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5XXP2Melanopsin OS=Phodopus sungorus OX=10044 GN=OPN4 PE=2 SV=1
Q8R456Melanopsin OS=Rattus norvegicus OX=10116 GN=Opn4 PE=1 SV=1
Q1JPS6Melanopsin-like OS=Danio rerio OX=7955 GN=opn4l PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR050125FamilyG-protein coupled receptor opsinsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24240OPSINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007602Biological ProcessphototransductionInterproscan
GO:0008020Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482Biological Processcellular response to light stimulusInterproscan

TOP