Detailed information of Pocillopora_acuta_HIv2___RNAseq.g5608.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000003:10499545...10501853
NR annotation: XP_027055695.1, uncharacterized protein LOC113682727 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O35214Visual pigment-like receptor peropsin OS=Mus musculus OX=10090 GN=Rrh PE=1 SV=1
Q6XL69Melanopsin OS=Rutilus rutilus OX=48668 GN=opn4 PE=2 SV=1
O14718Visual pigment-like receptor peropsin OS=Homo sapiens OX=9606 GN=RRH PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050125FamilyG-protein coupled receptor opsinsInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24240OPSINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0007602Biological ProcessphototransductionInterproscan
GO:0008020Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482Biological Processcellular response to light stimulusInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

TOP