Detailed information of Pocillopora_acuta_HIv2___RNAseq.g5637.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000003:10841874...10848068
NR annotation: XP_027036134.1, NLR family CARD domain-containing protein 4-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3UP24NLR family CARD domain-containing protein 4 OS=Mus musculus OX=10090 GN=Nlrc4 PE=1 SV=1
D9I2F9NACHT, LRR and PYD domains-containing protein 1a allele 1 OS=Rattus norvegicus OX=10116 GN=Nlrp1a PE=1 SV=1
D9I2G3NACHT, LRR and PYD domains-containing protein 1 allele 2 OS=Rattus norvegicus OX=10116 GN=Nlrp1a PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF05729NACHTNACHT domainDomainInterproscan
PF01335DEDDeath effector domainDomainInterproscan
PF00560LRR_1Leucine Rich RepeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR001875DomainDeath effector domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR006553RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46312NACHT DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan

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