Detailed information of Pocillopora_acuta_HIv2___RNAseq.g5811.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000063:825...15353
NR annotation: XP_027055251.1, deleted in malignant brain tumors 1 protein-like isoform X1 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UGM3Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Homo sapiens OX=9606 GN=DMBT1 PE=1 SV=2
Q95218Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Oryctolagus cuniculus OX=9986 GN=Dmbt1 PE=1 SV=2
P30205Antigen WC1.1 OS=Bos taurus OX=9913 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF00047igImmunoglobulin domainDomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001190DomainSRCR domainInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR006212RepeatFurin-like repeatInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR013151DomainImmunoglobulinInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR050686FamilySRCR-S1 Scavenger ReceptorInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48071SRCR DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan

TOP