Detailed information of Pocillopora_acuta_HIv2___RNAseq.g5812.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000063:17533...33980
NR annotation: CAH3139059.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9TU19Nephrocystin-1 (Fragment) OS=Canis lupus familiaris OX=9615 GN=NPHP1 PE=1 SV=1
Q9QY53Nephrocystin-1 OS=Mus musculus OX=10090 GN=Nphp1 PE=1 SV=1
O15259Nephrocystin-1 OS=Homo sapiens OX=9606 GN=NPHP1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018SH3_1SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR030642DomainNephrocystin-1, SH3 domainInterproscan
IPR039687FamilyNephrocystin-1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15176NEPHROCYSTINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0090251Biological Processprotein localization involved in establishment of planar polarityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19657NPHP1; nephrocystin-1-Cilium and associated proteinsko03037deepkoala

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