Detailed information of Pocillopora_acuta_HIv2___RNAseq.g5819.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000063:83246...95747
NR annotation: CAH3139072.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IY18Structural maintenance of chromosomes protein 5 OS=Homo sapiens OX=9606 GN=SMC5 PE=1 SV=2
Q8CG46Structural maintenance of chromosomes protein 5 OS=Mus musculus OX=10090 GN=Smc5 PE=1 SV=1
Q802R9Structural maintenance of chromosomes protein 5 OS=Takifugu rubripes OX=31033 GN=smc5 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13476AAA_23AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038729DomainRad50/SbcC-type AAA domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR027131FamilyStructural maintenance of chromosomes protein 5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45916STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0030915Cellular ComponentSmc5-Smc6 complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22803SMC5; structural maintenance of chromosomes protein 5-DNA repair and recombination proteinsko03400deepkoala

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