Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g5988.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000018:1543950...1547964
NR annotation: CAH3143983.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q9BV90	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP25 PE=1 SV=1
Q8VIK1	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus OX=10090 GN=Snrnp25 PE=1 SV=1
Q3ZBQ4	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus OX=9913 GN=SNRNP25 PE=2 SV=2

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_Other
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_PIM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18036	Ubiquitin_4	Ubiquitin-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040610	Domain	SNRNP25, ubiquitin-like domain	Interproscan
IPR039690	Family	U11/U12 small nuclear ribonucleoprotein 25kDa protein	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR000626	Domain	Ubiquitin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14942	U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0005689	Cellular Component	U12-type spliceosomal complex	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan