Detailed information of Pocillopora_acuta_HIv2___RNAseq.g6216.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000005:1128162...1134510
NR annotation: XP_027041229.1, interferon regulatory factor 2-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q98925Interferon regulatory factor 2 OS=Gallus gallus OX=9031 GN=IRF2 PE=2 SV=1
P14316Interferon regulatory factor 2 OS=Homo sapiens OX=9606 GN=IRF2 PE=1 SV=2
P23906Interferon regulatory factor 2 OS=Mus musculus OX=10090 GN=Irf2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00605IRFInterferon regulatory factor transcription factorDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR001346DomainInterferon regulatory factor, DNA-binding domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11949INTERFERON REGULATORY FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0002376Biological Processimmune system processInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10153IRF2; interferon regulatory factor 2-Transcription factorsko03000deepkoala

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