Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g6358.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000005:3356570...3358658
NR annotation: RMX61569.1, hypothetical protein pdam_00020437, partial [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q61361	Brevican core protein OS=Mus musculus OX=10090 GN=Bcan PE=1 SV=2
P55068	Brevican core protein OS=Rattus norvegicus OX=10116 GN=Bcan PE=1 SV=2
Q96GW7	Brevican core protein OS=Homo sapiens OX=9606 GN=BCAN PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR042808	Family	C-type lectin domain family 7 member A	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47218	C-TYPE LECTIN DOMAIN FAMILY 7 MEMBER A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001872	Molecular Function	(1->3)-beta-D-glucan binding	Interproscan
GO:0006910	Biological Process	phagocytosis, recognition	Interproscan
GO:0008284	Biological Process	positive regulation of cell population proliferation	Interproscan
GO:0009986	Cellular Component	cell surface	Interproscan
GO:0016046	Biological Process	detection of fungus	Interproscan
GO:0030335	Biological Process	positive regulation of cell migration	Interproscan
GO:0032491	Biological Process	detection of molecule of fungal origin	Interproscan
GO:0038187	Molecular Function	pattern recognition receptor activity	Interproscan
GO:0050766	Biological Process	positive regulation of phagocytosis	Interproscan
GO:0051251	Biological Process	positive regulation of lymphocyte activation	Interproscan
GO:0051712	Biological Process	positive regulation of killing of cells of another organism	Interproscan
GO:0071226	Biological Process	cellular response to molecule of fungal origin	Interproscan
GO:0090303	Biological Process	positive regulation of wound healing	Interproscan
GO:1900017	Biological Process	positive regulation of cytokine production involved in inflammatory response	Interproscan