Detailed information of Pocillopora_acuta_HIv2___RNAseq.g6863.t1a in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000019:100431...112221
NR annotation: PFX19267.1, Polycystic kidney disease protein 1-like 2 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O97394Protein sidekick OS=Drosophila melanogaster OX=7227 GN=sdk PE=1 SV=2
A7MBJ4Receptor-type tyrosine-protein phosphatase F OS=Bos taurus OX=9913 GN=PTPRF PE=2 SV=1
A2A8L5Receptor-type tyrosine-protein phosphatase F OS=Mus musculus OX=10090 GN=Ptprf PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00088TrefoilTrefoil (P-type) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR044913Homologous_superfamilyP-type trefoil domain superfamilyInterproscan
IPR000519DomainP-type trefoil domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44170PROTEIN SIDEKICKInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

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