Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g6965.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000019:1500096...1505614
NR annotation: CAH3034344.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P07174	Tumor necrosis factor receptor superfamily member 16 OS=Rattus norvegicus OX=10116 GN=Ngfr PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR052302	Family	Neurotrophin receptor-related death domain-containing protein	Interproscan
IPR001368	Domain	TNFR/NGFR cysteine-rich region	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46605	TUMOR NECROSIS FACTOR RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005035	Molecular Function	death receptor activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007266	Biological Process	Rho protein signal transduction	Interproscan
GO:0009986	Cellular Component	cell surface	Interproscan
GO:0015026	Molecular Function	coreceptor activity	Interproscan
GO:0048406	Molecular Function	nerve growth factor binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02583	NGFR, TNFRSF16, CD271; tumor necrosis factor receptor superfamily member 16	-	CD molecules	ko04090	deepkoala