Detailed information of Pocillopora_acuta_HIv2___RNAseq.g6984.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000019:1858469...1865388
NR annotation: XP_027042006.1, uncharacterized protein LOC113670111 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99U50L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=tdcB PE=3 SV=1
Q7A5L8L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus (strain N315) OX=158879 GN=tdcB PE=1 SV=1
Q2FH01L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus (strain USA300) OX=367830 GN=tdcB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00291PALPPyridoxal-phosphate dependent enzymeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050147FamilySerine/Threonine DehydrataseInterproscan
IPR001926DomainTryptophan synthase beta chain-like, PALP domainInterproscan
IPR036052Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan
IPR000634Binding_siteSerine/threonine dehydratase, pyridoxal-phosphate-binding siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48078THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003941Molecular FunctionL-serine ammonia-lyase activityInterproscan
GO:0004794Molecular Functionthreonine deaminase activityInterproscan
GO:0006565Biological ProcessL-serine catabolic processInterproscan
GO:0006567Biological Processthreonine catabolic processInterproscan
GO:0009097Biological Processisoleucine biosynthetic processInterproscan
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01754E4.3.1.19, ilvA, tdcB; threonine dehydrataseEC:4.3.1.19
Valine, leucine and isoleucine biosynthesisko00290deepkoala

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