Detailed information of Pocillopora_acuta_HIv2___RNAseq.g7576.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000001:3704862...3717530
NR annotation: XP_027036214.1, cleavage and polyadenylation specificity factor subunit 6-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6NWC6Cleavage and polyadenylation specificity factor subunit 6 OS=Danio rerio OX=7955 GN=cpsf6 PE=2 SV=1
Q6NVF9Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1
Q0P5D2Cleavage and polyadenylation specificity factor subunit 6 OS=Bos taurus OX=9913 GN=CPSF6 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR034769DomainCleavage and polyadenylation specificity factor subunit 6, RNA recognition motifInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR034772FamilyCPSF6/7 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23204CLEAVAGE AND POLYADENYLATION SPECIFIC FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005847Cellular ComponentmRNA cleavage and polyadenylation specificity factor complexInterproscan
GO:0098789Biological Processobsolete pre-mRNA cleavage required for polyadenylationInterproscan
GO:0110104Biological ProcessmRNA alternative polyadenylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14398CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7-Messenger RNA biogenesisko03019deepkoala

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