Detailed information of Pocillopora_acuta_HIv2___RNAseq.g7692.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000001:5396973...5408964
NR annotation: CAH3039778.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O09118Netrin-1 OS=Mus musculus OX=10090 GN=Ntn1 PE=1 SV=3
O95631Netrin-1 OS=Homo sapiens OX=9606 GN=NTN1 PE=1 SV=2
Q2HXW4Netrin-1 OS=Sus scrofa OX=9823 GN=NTN1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00055Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan
PF01759NTRUNC-6/NTR/C345C moduleDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002049DomainLaminin-type EGF domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR008993Homologous_superfamilyTissue inhibitor of metalloproteinases-like, OB-foldInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR008211DomainLaminin, N-terminalInterproscan
IPR001134DomainNetrin domainInterproscan
IPR018933DomainNetrin module, non-TIMP typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005604Cellular Componentbasement membraneInterproscan
GO:0008045Biological Processmotor neuron axon guidanceInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan
GO:0016358Biological Processdendrite developmentInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06843NTN1; netrin 1-Glycosaminoglycan binding proteinsko00536deepkoala

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