Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g8096.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000001:10641791...10646907
NR annotation: XP_027037477.1, sorting nexin-16-like isoform X1 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8C080	Sorting nexin-16 OS=Mus musculus OX=10090 GN=Snx16 PE=1 SV=2
P57769	Sorting nexin-16 OS=Rattus norvegicus OX=10116 GN=Snx16 PE=1 SV=2
P57768	Sorting nexin-16 OS=Homo sapiens OX=9606 GN=SNX16 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00787	PX	PX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036871	Homologous_superfamily	PX domain superfamily	Interproscan
IPR001683	Domain	Phox homology	Interproscan
IPR051837	Family	Sorting Nexin/PX Domain-Containing Protein Kinase-Like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22999	PX SERINE/THREONINE KINASE PXK	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0035091	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0005769	Cellular Component	early endosome	Interproscan
GO:0005770	Cellular Component	late endosome	Interproscan
GO:0006622	Biological Process	protein targeting to lysosome	Interproscan
GO:0008333	Biological Process	endosome to lysosome transport	Interproscan
GO:0031313	Cellular Component	extrinsic component of endosome membrane	Interproscan
GO:0045022	Biological Process	early endosome to late endosome transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17928	SNX16; sorting nexin-16	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala