Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g82.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000015:62189...75433
NR annotation: CAH3154561.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
P58742	Aladin OS=Mus musculus OX=10090 GN=Aaas PE=1 SV=1
Q9NRG9	Aladin OS=Homo sapiens OX=9606 GN=AAAS PE=1 SV=1
Q9W351	Aladin OS=Drosophila melanogaster OX=7227 GN=Aladin PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR045139	Family	Aladin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14494	ALADIN/ADRACALIN/AAAS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005643	Cellular Component	nuclear pore	Interproscan
GO:0006913	Biological Process	nucleocytoplasmic transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14320	AAAS; aladin	-	Messenger RNA biogenesis	ko03019	deepkoala