Detailed information of Pocillopora_acuta_HIv2___RNAseq.g8215.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000018:1145104...1175304
NR annotation: XP_027059446.1, focadhesin-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E7FGT5Focadhesin OS=Danio rerio OX=7955 GN=focad PE=3 SV=2
Q5VW36Focadhesin OS=Homo sapiens OX=9606 GN=FOCAD PE=1 SV=2
A2AKG8Focadhesin OS=Mus musculus OX=10090 GN=Focad PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12530DUF3730Focadhesin/RST1, DUF3730RepeatInterproscan
PF11229FocadhesinFocadhesinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR022542DomainFocadhesin/RST, DUF3730Interproscan
IPR045163FamilyFocadhesin/RST1Interproscan
IPR021392DomainFocadhesin, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16212FOCADHESIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0060147Biological Processregulation of post-transcriptional gene silencingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K27498FOCAD; focadhesin-Messenger RNA biogenesisko03019deepkoala

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