Detailed information of Pocillopora_acuta_HIv2___RNAseq.g8247.t1b in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000018:1503214...1503861
NR annotation: XP_015749342.1, PREDICTED: tigger transposable element-derived protein 4-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O75564Jerky protein homolog OS=Homo sapiens OX=9606 GN=JRK PE=1 SV=3
G3MY25Tigger transposable element-derived protein 5 OS=Bos taurus OX=9913 GN=TIGD5 PE=3 SV=2
Q60976Jerky protein OS=Mus musculus OX=10090 GN=Jrk PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF04218CENP-B_NCENP-B N-terminal DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303TRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

TOP