Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g8312.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000018:2312753...2317554
NR annotation: XP_027045076.1, cyclin-Q-like [Pocillopora damicornis]
Species abbreviation PACUT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NRK9	Cyclin-Q OS=Xenopus laevis OX=8355 GN=ccnq PE=2 SV=2
Q4QQW5	Cyclin-Q OS=Rattus norvegicus OX=10116 GN=Ccnq PE=2 SV=1
Q8QZR8	Cyclin-Q OS=Mus musculus OX=10090 GN=Ccnq PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005161 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00134 all species →	Cyclin_N	Cyclin, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048053 all species →	Domain	Cyclin-Q, second cyclin box	Interproscan
IPR013763 all species →	Domain	Cyclin-like domain	Interproscan
IPR036915 all species →	Homologous_superfamily	Cyclin-like superfamily	Interproscan
IPR043198 all species →	Family	Cyclin/Cyclin-like subunit Ssn8	Interproscan
IPR006671 all species →	Domain	Cyclin, N-terminal	Interproscan
IPR048055 all species →	Domain	Cyclin-Q, first cyclin box	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10026 all species →	CYCLIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0016538 all species →	Molecular Function	cyclin-dependent protein serine/threonine kinase regulator activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23964	CCNQ, FAM58A; cyclin-Q	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.