Detailed information of Pocillopora_acuta_HIv2___RNAseq.g835.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000002:5351044...5368051
NR annotation: XP_027048494.1, circadian locomoter output cycles protein kaput-like isoform X2 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q95LD9Aryl hydrocarbon receptor OS=Delphinapterus leucas OX=9749 GN=AHR PE=2 SV=1
P35869Aryl hydrocarbon receptor OS=Homo sapiens OX=9606 GN=AHR PE=1 SV=2
O02747Aryl hydrocarbon receptor OS=Oryctolagus cuniculus OX=9986 GN=AHR PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00989PASPAS foldDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF08447PAS_3PAS foldDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013767DomainPAS foldInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR000014DomainPAS domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR013655DomainPAS fold-3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23043HYPOXIA-INDUCIBLE FACTOR 1 ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09093AHR; aryl hydrocarbon receptor-Transcription factorsko03000deepkoala

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