Detailed information of Pocillopora_acuta_HIv2___RNAseq.g8406.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000018:3571707...3580717
NR annotation: XP_027052596.1, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9JHS4ATP-dependent clpX-like chaperone, mitochondrial OS=Mus musculus OX=10090 GN=Clpx PE=1 SV=2
Q5U2U0ATP-dependent clpX-like chaperone, mitochondrial OS=Rattus norvegicus OX=10116 GN=Clpx PE=2 SV=1
O76031ATP-dependent clpX-like chaperone, mitochondrial OS=Homo sapiens OX=9606 GN=CLPX PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07724AAA_2AAA domain (Cdc48 subfamily)DomainInterproscan
PF10431ClpB_D2-smallC-terminal, D2-small domain, of ClpB protein DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050052FamilyATP-dependent Clp protease ATP-binding subunit ClpXInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR019489DomainClp ATPase, C-terminalInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR004487FamilyClp protease, ATP-binding subunit ClpXInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48102ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005759Cellular Componentmitochondrial matrixInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0051082Molecular Functionunfolded protein bindingInterproscan
GO:0140662Molecular FunctionATP-dependent protein folding chaperoneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03544clpX, CLPX; ATP-dependent Clp protease ATP-binding subunit ClpX-Chaperones and folding catalystsko03110deepkoala

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