Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g8587.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000027:183050...190899
NR annotation: XP_027059149.1, zinc metalloproteinase nas-14-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q19269	Zinc metalloproteinase nas-14 OS=Caenorhabditis elegans OX=6239 GN=nas-14 PE=2 SV=2
P55112	Zinc metalloproteinase nas-4 OS=Caenorhabditis elegans OX=6239 GN=nas-4 PE=2 SV=4
Q20191	Zinc metalloproteinase nas-13 OS=Caenorhabditis elegans OX=6239 GN=nas-13 PE=2 SV=5

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01549	ShK	ShK domain-like	Domain	Interproscan
PF01400	Astacin	Astacin (Peptidase family M12A)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001506	Domain	Peptidase M12A	Interproscan
IPR003582	Domain	ShKT domain	Interproscan
IPR006026	Domain	Peptidase, metallopeptidase	Interproscan
IPR034035	Domain	Astacin-like metallopeptidase domain	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10127	DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan