Detailed information of Pocillopora_acuta_HIv2___RNAseq.g8693.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000027:1134124...1168245
NR annotation: XP_027053472.1, nucleoporin NUP188 homolog [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5SRE5Nucleoporin NUP188 OS=Homo sapiens OX=9606 GN=NUP188 PE=1 SV=1
Q6ZQH8Nucleoporin NUP188 OS=Mus musculus OX=10090 GN=Nup188 PE=1 SV=2
F6WXT2Nucleoporin NUP188 OS=Xenopus tropicalis OX=8364 GN=nup188 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10487Nup188_NNucleoporin Nup188, N-terminalRepeatInterproscan
PF21093Nup188_N-subdom_IIINucleoporin Nup188, N-terminal subdomain IIIRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044840FamilyNucleoporin Nup188Interproscan
IPR018864DomainNucleoporin Nup188, N-terminalInterproscan
IPR048883DomainNucleoporin Nup188, N-terminal subdomain IIIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31431NUCLEOPORIN NUP188 HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006405Biological ProcessRNA export from nucleusInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan
GO:0017056Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0044611Cellular Componentnuclear pore inner ringInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14311NUP188; nuclear pore complex protein Nup188-Messenger RNA biogenesisko03019deepkoala

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